Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF139Q8WU17 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF139Q8WU17 SIRPAP1-201ENST00000448467 1770 ntBASIC18.45■□□□□ 0.54
RNF139Q8WU17 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 AKR1C7P-201ENST00000305623 895 ntBASIC18.44■□□□□ 0.54
RNF139Q8WU17 RBM17P3-201ENST00000417687 1192 ntBASIC18.44■□□□□ 0.54
RNF139Q8WU17 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 AC008608.2-201ENST00000606089 416 ntBASIC18.44■□□□□ 0.54
RNF139Q8WU17 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF139Q8WU17 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF139Q8WU17 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 MTDHP3-201ENST00000594186 672 ntBASIC18.43■□□□□ 0.54
RNF139Q8WU17 AP001269.4-201ENST00000609611 512 ntBASIC18.43■□□□□ 0.54
RNF139Q8WU17 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
RNF139Q8WU17 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF139Q8WU17 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms