Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PROM2Q8N271 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PROM2Q8N271 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PROM2Q8N271 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PROM2Q8N271 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PROM2Q8N271 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PROM2Q8N271 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.17■■□□□ 1.14
PROM2Q8N271 ANO7L1-203ENST00000602586 1720 ntBASIC22.17■■□□□ 1.14
PROM2Q8N271 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PROM2Q8N271 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.17■■□□□ 1.14
PROM2Q8N271 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC22.17■■□□□ 1.14
PROM2Q8N271 SPDYE7P-202ENST00000420373 878 ntBASIC22.17■■□□□ 1.14
PROM2Q8N271 TSSK5P-201ENST00000423978 907 ntBASIC22.17■■□□□ 1.14
PROM2Q8N271 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 IGHV3-52-201ENST00000519770 353 ntBASIC22.17■■□□□ 1.14
PROM2Q8N271 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 THTPA-204ENST00000554970 569 ntTSL 4 BASIC22.17■■□□□ 1.14
PROM2Q8N271 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
PROM2Q8N271 THTPA-206ENST00000556015 535 ntTSL 3 BASIC22.17■■□□□ 1.14
PROM2Q8N271 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC22.17■■□□□ 1.14
PROM2Q8N271 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.17■■□□□ 1.14
PROM2Q8N271 AL645728.2-201ENST00000641974 660 ntBASIC22.17■■□□□ 1.14
PROM2Q8N271 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PROM2Q8N271 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.17■■□□□ 1.14
PROM2Q8N271 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.17■■□□□ 1.14
PROM2Q8N271 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PROM2Q8N271 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.16■■□□□ 1.14
PROM2Q8N271 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PROM2Q8N271 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 MTND4LP12-201ENST00000448237 295 ntBASIC22.16■■□□□ 1.14
PROM2Q8N271 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC22.16■■□□□ 1.14
PROM2Q8N271 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.16■■□□□ 1.14
PROM2Q8N271 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.16■■□□□ 1.14
PROM2Q8N271 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PROM2Q8N271 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC22.16■■□□□ 1.14
PROM2Q8N271 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.16■■□□□ 1.14
PROM2Q8N271 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PROM2Q8N271 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PROM2Q8N271 CU639417.3-201ENST00000624240 1404 ntBASIC22.15■■□□□ 1.14
PROM2Q8N271 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.15■■□□□ 1.14
PROM2Q8N271 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.15■■□□□ 1.14
PROM2Q8N271 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.15■■□□□ 1.14
PROM2Q8N271 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.15■■□□□ 1.14
PROM2Q8N271 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 PGF-202ENST00000405431 666 ntTSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 AC241585.1-201ENST00000433527 519 ntBASIC22.15■■□□□ 1.14
PROM2Q8N271 AC087163.2-201ENST00000457299 853 ntBASIC22.15■■□□□ 1.14
PROM2Q8N271 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC22.15■■□□□ 1.14
PROM2Q8N271 IFT20-216ENST00000588477 774 ntTSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.15■■□□□ 1.14
PROM2Q8N271 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 CFTRP2-201ENST00000634304 199 ntBASIC22.15■■□□□ 1.14
PROM2Q8N271 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.15■■□□□ 1.14
PROM2Q8N271 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PROM2Q8N271 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.14■■□□□ 1.14
PROM2Q8N271 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.14■■□□□ 1.14
PROM2Q8N271 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms