Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 AC011840.4-201ENST00000578471 627 ntBASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.05■□□□□ 0.48
CDKL3Q8IVW4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 IGHV3-52-201ENST00000519770 353 ntBASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL3Q8IVW4 AC080080.1-201ENST00000625121 2420 ntBASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AC106820.2-201ENST00000563775 3264 ntBASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AL031133.1-201ENST00000406807 723 ntBASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AL845331.1-201ENST00000424978 1190 ntBASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AL138831.2-201ENST00000606564 490 ntBASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 AC019129.2-201ENST00000609837 1235 ntBASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKL3Q8IVW4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 VENTXP7-201ENST00000475503 772 ntBASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 AC122714.2-201ENST00000502787 707 ntBASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 AL049597.2-201ENST00000565575 961 ntBASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 AC005336.2-201ENST00000593183 939 ntBASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 AC012313.1-201ENST00000593393 3059 ntBASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.02■□□□□ 0.48
CDKL3Q8IVW4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDKL3Q8IVW4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms