Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 AC093028.1-201ENST00000622998 982 ntBASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 AL138781.2-201ENST00000617896 1843 ntBASIC18.7■□□□□ 0.58
NPAS4Q8IUM7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 REXO1L3P-201ENST00000622202 1288 ntBASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NPAS4Q8IUM7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 AC046185.3-201ENST00000623228 1824 ntBASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 AC105339.1-204ENST00000636249 355 ntBASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 AL135999.2-201ENST00000622438 1686 ntBASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.68■□□□□ 0.58
NPAS4Q8IUM7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 AL139400.1-201ENST00000366220 510 ntBASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 MIR770-201ENST00000390219 98 ntBASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 PAWRP1-201ENST00000451083 565 ntBASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 AL513480.1-201ENST00000451731 511 ntBASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 ACTL9-202ENST00000612068 1252 ntBASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms