Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MIR1224-201ENST00000408193 85 ntBASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 AC246785.2-201ENST00000432512 513 ntBASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NHLRC1Q6VVB1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 BX276092.7-203ENST00000637198 1536 ntBASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 DRAXINP1-201ENST00000437611 948 ntBASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 TSSC2-201ENST00000450217 709 ntBASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 NPAP1P7-201ENST00000613027 823 ntBASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 AD000864.1-201ENST00000624076 2295 ntBASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NHLRC1Q6VVB1 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 AC007967.3-201ENST00000434308 558 ntBASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 TPSP2-201ENST00000561760 610 ntBASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 AC018695.7-201ENST00000624587 2492 ntBASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.78■□□□□ 0.12
NHLRC1Q6VVB1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms