Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 AC003669.1-201ENST00000334569 611 ntBASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 AC109462.3-201ENST00000573934 613 ntBASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 AL589182.2-201ENST00000619332 1049 ntBASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3F3CQ6NXT2 AC009113.1-201ENST00000570267 2443 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 AL390961.4-201ENST00000623958 2535 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 AC004817.3-201ENST00000602957 2129 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 KRT18P27-201ENST00000427733 1299 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 AC002558.1-201ENST00000488906 803 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 KRT18P58-201ENST00000527480 1120 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 AC117500.6-201ENST00000624871 588 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 ZNF259P1-201ENST00000407656 1365 ntBASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
H3F3CQ6NXT2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
H3F3CQ6NXT2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.21■□□□□ 0.18
H3F3CQ6NXT2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
H3F3CQ6NXT2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 AC138028.4-201ENST00000564984 1845 ntBASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 KLF4P1-201ENST00000412782 1185 ntBASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 AC098831.1-202ENST00000438821 336 ntBASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 AC092910.1-201ENST00000482027 1129 ntBASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms