Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 POM121L3P-201ENST00000419331 1163 ntBASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 KRT17P6-201ENST00000453795 1220 ntBASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 AC092119.3-201ENST00000612618 583 ntBASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL1Q6NVV3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 AC096633.1-201ENST00000422446 749 ntBASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 DDX43P3-201ENST00000441064 443 ntBASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 NUS1P1-201ENST00000446295 882 ntBASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 MIR3652-201ENST00000579335 131 ntBASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL1Q6NVV3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPAL1Q6NVV3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms