Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 BTNL10-201ENST00000595971 695 ntBASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 AC007967.4-201ENST00000614700 386 ntBASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL13A1Q5TAT6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL13A1Q5TAT6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 TMEM198B-204ENST00000484016 896 ntBASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 AC015936.2-201ENST00000593177 259 ntBASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 HLA-C-210ENST00000640219 976 ntBASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.47■□□□□ 0.71
COL13A1Q5TAT6 IRX1P1-201ENST00000438849 1838 ntBASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 MTMR9LP-203ENST00000426597 1545 ntBASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 EIF4HP1-201ENST00000453115 687 ntBASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 SLC25A6P2-201ENST00000497974 877 ntBASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL13A1Q5TAT6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL13A1Q5TAT6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms