Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 AC099398.1-201ENST00000567919 2776 ntBASIC19.97■□□□□ 0.79
LONRF3Q496Y0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 GPR32P1-201ENST00000601788 811 ntBASIC19.97■□□□□ 0.79
LONRF3Q496Y0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.97■□□□□ 0.79
LONRF3Q496Y0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 AC246785.2-201ENST00000432512 513 ntBASIC19.96■□□□□ 0.79
LONRF3Q496Y0 DRAXINP1-201ENST00000437611 948 ntBASIC19.96■□□□□ 0.79
LONRF3Q496Y0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 AC124864.1-201ENST00000623408 392 ntBASIC19.96■□□□□ 0.79
LONRF3Q496Y0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
LONRF3Q496Y0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
LONRF3Q496Y0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 MTCL1P1-201ENST00000446207 792 ntBASIC19.95■□□□□ 0.78
LONRF3Q496Y0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 AC138894.3-201ENST00000603787 634 ntBASIC19.95■□□□□ 0.78
LONRF3Q496Y0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 AD000864.1-201ENST00000624076 2295 ntBASIC19.95■□□□□ 0.78
LONRF3Q496Y0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LONRF3Q496Y0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms