Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.13■□□□□ 0.81
HTRA3P83110 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.13■□□□□ 0.81
HTRA3P83110 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.13■□□□□ 0.81
HTRA3P83110 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 AC027307.2-201ENST00000591252 911 ntBASIC20.13■□□□□ 0.81
HTRA3P83110 AC007431.3-201ENST00000623221 587 ntBASIC20.13■□□□□ 0.81
HTRA3P83110 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HTRA3P83110 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.13■□□□□ 0.81
HTRA3P83110 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HTRA3P83110 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HTRA3P83110 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HTRA3P83110 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HTRA3P83110 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HTRA3P83110 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.12■□□□□ 0.81
HTRA3P83110 AC087163.2-201ENST00000457299 853 ntBASIC20.12■□□□□ 0.81
HTRA3P83110 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 AL583810.1-201ENST00000553344 1045 ntBASIC20.12■□□□□ 0.81
HTRA3P83110 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.12■□□□□ 0.81
HTRA3P83110 AL844908.2-201ENST00000609461 460 ntBASIC20.12■□□□□ 0.81
HTRA3P83110 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.12■□□□□ 0.81
HTRA3P83110 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HTRA3P83110 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HTRA3P83110 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.12■□□□□ 0.81
HTRA3P83110 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HTRA3P83110 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTRA3P83110 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HTRA3P83110 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTRA3P83110 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTRA3P83110 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 MIR346-201ENST00000362234 95 ntBASIC20.11■□□□□ 0.81
HTRA3P83110 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HTRA3P83110 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTRA3P83110 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.11■□□□□ 0.81
HTRA3P83110 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 MIR663B-201ENST00000408361 115 ntBASIC20.11■□□□□ 0.81
HTRA3P83110 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.11■□□□□ 0.81
HTRA3P83110 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
HTRA3P83110 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
HTRA3P83110 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.11■□□□□ 0.81
HTRA3P83110 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
HTRA3P83110 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.11■□□□□ 0.81
HTRA3P83110 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.11■□□□□ 0.81
HTRA3P83110 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HTRA3P83110 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
HTRA3P83110 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.1■□□□□ 0.81
HTRA3P83110 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.1■□□□□ 0.81
HTRA3P83110 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HTRA3P83110 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 HMGA1P7-201ENST00000406908 502 ntBASIC20.1■□□□□ 0.81
HTRA3P83110 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.1■□□□□ 0.81
HTRA3P83110 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.1■□□□□ 0.81
HTRA3P83110 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.1■□□□□ 0.81
HTRA3P83110 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.1■□□□□ 0.81
HTRA3P83110 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.1■□□□□ 0.81
HTRA3P83110 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.1■□□□□ 0.81
HTRA3P83110 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTRA3P83110 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.1■□□□□ 0.81
HTRA3P83110 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.09■□□□□ 0.81
HTRA3P83110 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTRA3P83110 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTRA3P83110 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTRA3P83110 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.09■□□□□ 0.81
HTRA3P83110 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
HTRA3P83110 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTRA3P83110 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTRA3P83110 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTRA3P83110 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.09■□□□□ 0.81
HTRA3P83110 AC087499.6-201ENST00000411576 835 ntBASIC20.09■□□□□ 0.81
HTRA3P83110 AC135586.1-201ENST00000539323 574 ntBASIC20.09■□□□□ 0.81
HTRA3P83110 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.09■□□□□ 0.81
HTRA3P83110 AC018529.1-201ENST00000613063 361 ntBASIC20.09■□□□□ 0.81
HTRA3P83110 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.09■□□□□ 0.81
HTRA3P83110 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.09■□□□□ 0.81
HTRA3P83110 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTRA3P83110 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms