Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CMC4P56277 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.09□□□□□ -0.31
CMC4P56277 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMC4P56277 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.08□□□□□ -0.31
CMC4P56277 AC133963.1-201ENST00000504166 1679 ntBASIC13.08□□□□□ -0.31
CMC4P56277 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CMC4P56277 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CMC4P56277 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.08□□□□□ -0.31
CMC4P56277 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.08□□□□□ -0.31
CMC4P56277 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.08□□□□□ -0.31
CMC4P56277 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 RPS2P28-201ENST00000314255 741 ntBASIC13.08□□□□□ -0.32
CMC4P56277 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 AL020989.1-201ENST00000422979 469 ntBASIC13.08□□□□□ -0.32
CMC4P56277 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.08□□□□□ -0.32
CMC4P56277 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.08□□□□□ -0.32
CMC4P56277 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 AC073592.5-201ENST00000624854 528 ntBASIC13.08□□□□□ -0.32
CMC4P56277 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 AP000867.4-201ENST00000641616 219 ntBASIC13.08□□□□□ -0.32
CMC4P56277 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
CMC4P56277 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CMC4P56277 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
CMC4P56277 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMC4P56277 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.07□□□□□ -0.32
CMC4P56277 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.07□□□□□ -0.32
CMC4P56277 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.07□□□□□ -0.32
CMC4P56277 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 KLF4P1-201ENST00000412782 1185 ntBASIC13.07□□□□□ -0.32
CMC4P56277 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 PRYP5-201ENST00000451909 266 ntBASIC13.07□□□□□ -0.32
CMC4P56277 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.07□□□□□ -0.32
CMC4P56277 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.07□□□□□ -0.32
CMC4P56277 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 IFNL4P1-201ENST00000607083 540 ntBASIC13.07□□□□□ -0.32
CMC4P56277 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.07□□□□□ -0.32
CMC4P56277 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.07□□□□□ -0.32
CMC4P56277 REXO1L6P-202ENST00000619970 1078 ntBASIC13.07□□□□□ -0.32
CMC4P56277 AL139288.1-201ENST00000623748 933 ntBASIC13.07□□□□□ -0.32
CMC4P56277 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms