Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH12P55289 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDH12P55289 AC012306.2-201ENST00000609350 630 ntBASIC16.38■□□□□ 0.21
CDH12P55289 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDH12P55289 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH12P55289 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH12P55289 AC106886.4-201ENST00000623557 2502 ntBASIC16.38■□□□□ 0.21
CDH12P55289 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDH12P55289 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDH12P55289 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.37■□□□□ 0.21
CDH12P55289 KRT89P-201ENST00000620027 1478 ntBASIC16.37■□□□□ 0.21
CDH12P55289 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDH12P55289 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CDH12P55289 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 AC113347.1-201ENST00000413321 391 ntBASIC16.37■□□□□ 0.21
CDH12P55289 AL136038.4-201ENST00000603606 1261 ntBASIC16.37■□□□□ 0.21
CDH12P55289 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 AC005363.2-201ENST00000618631 242 ntBASIC16.37■□□□□ 0.21
CDH12P55289 AC011558.1-201ENST00000623459 338 ntBASIC16.37■□□□□ 0.21
CDH12P55289 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDH12P55289 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDH12P55289 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH12P55289 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH12P55289 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH12P55289 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH12P55289 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH12P55289 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH12P55289 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CDH12P55289 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH12P55289 AL137013.1-201ENST00000432946 1228 ntBASIC16.36■□□□□ 0.21
CDH12P55289 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.36■□□□□ 0.21
CDH12P55289 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH12P55289 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH12P55289 AC139887.4-201ENST00000607877 719 ntBASIC16.36■□□□□ 0.21
CDH12P55289 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDH12P55289 AC073912.3-201ENST00000624414 853 ntBASIC16.36■□□□□ 0.21
CDH12P55289 AC097493.4-201ENST00000641197 219 ntBASIC16.36■□□□□ 0.21
CDH12P55289 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 UBALD1-205ENST00000590891 2641 ntBASIC16.36■□□□□ 0.21
CDH12P55289 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CDH12P55289 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 KRT8P47-201ENST00000604727 1398 ntBASIC16.36■□□□□ 0.21
CDH12P55289 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.36■□□□□ 0.21
CDH12P55289 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH12P55289 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH12P55289 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH12P55289 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDH12P55289 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.35■□□□□ 0.21
CDH12P55289 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH12P55289 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms