Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPL35P42766 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPL35P42766 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
RPL35P42766 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.2□□□□□ -0.14
RPL35P42766 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.2□□□□□ -0.14
RPL35P42766 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.2□□□□□ -0.14
RPL35P42766 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.2□□□□□ -0.14
RPL35P42766 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.2□□□□□ -0.14
RPL35P42766 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPL35P42766 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL35P42766 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 AC015656.1-201ENST00000624209 3578 ntBASIC14.19□□□□□ -0.14
RPL35P42766 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
RPL35P42766 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 RPS2P52-201ENST00000469610 820 ntBASIC14.19□□□□□ -0.14
RPL35P42766 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.19□□□□□ -0.14
RPL35P42766 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.19□□□□□ -0.14
RPL35P42766 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 AL121906.2-201ENST00000621597 723 ntBASIC14.19□□□□□ -0.14
RPL35P42766 AC068587.9-201ENST00000641814 219 ntBASIC14.19□□□□□ -0.14
RPL35P42766 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 AC138035.3-201ENST00000622706 2791 ntBASIC14.19□□□□□ -0.14
RPL35P42766 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL35P42766 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 FAM45BP-202ENST00000592932 1624 ntBASIC14.19□□□□□ -0.14
RPL35P42766 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.19□□□□□ -0.14
RPL35P42766 AC008556.1-201ENST00000610908 2040 ntBASIC14.19□□□□□ -0.14
RPL35P42766 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL35P42766 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.18□□□□□ -0.14
RPL35P42766 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL35P42766 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL35P42766 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL35P42766 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL35P42766 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.18□□□□□ -0.14
RPL35P42766 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 AC007686.3-201ENST00000619017 3487 ntBASIC14.18□□□□□ -0.14
RPL35P42766 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL35P42766 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.18□□□□□ -0.14
RPL35P42766 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.18□□□□□ -0.14
RPL35P42766 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL35P42766 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL35P42766 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL35P42766 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL35P42766 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 RAP2CP1-201ENST00000605103 478 ntBASIC14.18□□□□□ -0.14
RPL35P42766 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms