Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCND1P24385 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 RASA4DP-201ENST00000460726 1199 ntBASIC17.72■□□□□ 0.43
CCND1P24385 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.72■□□□□ 0.43
CCND1P24385 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 AL157888.1-201ENST00000631930 593 ntBASIC17.72■□□□□ 0.43
CCND1P24385 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.72■□□□□ 0.43
CCND1P24385 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCND1P24385 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCND1P24385 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.72■□□□□ 0.43
CCND1P24385 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.72■□□□□ 0.43
CCND1P24385 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.72■□□□□ 0.43
CCND1P24385 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCND1P24385 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCND1P24385 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CCND1P24385 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.71■□□□□ 0.43
CCND1P24385 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.71■□□□□ 0.43
CCND1P24385 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.71■□□□□ 0.43
CCND1P24385 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 AGGF1P2-201ENST00000426656 2106 ntBASIC17.71■□□□□ 0.43
CCND1P24385 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.71■□□□□ 0.43
CCND1P24385 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCND1P24385 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCND1P24385 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.71■□□□□ 0.43
CCND1P24385 AK4P3-201ENST00000418260 669 ntBASIC17.71■□□□□ 0.43
CCND1P24385 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.71■□□□□ 0.43
CCND1P24385 TSPY5P-201ENST00000426936 936 ntBASIC17.71■□□□□ 0.43
CCND1P24385 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.71■□□□□ 0.43
CCND1P24385 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.71■□□□□ 0.43
CCND1P24385 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.71■□□□□ 0.43
CCND1P24385 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.71■□□□□ 0.43
CCND1P24385 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.71■□□□□ 0.43
CCND1P24385 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCND1P24385 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCND1P24385 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCND1P24385 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.71■□□□□ 0.42
CCND1P24385 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.71■□□□□ 0.42
CCND1P24385 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCND1P24385 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCND1P24385 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.7■□□□□ 0.42
CCND1P24385 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCND1P24385 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
CCND1P24385 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCND1P24385 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 LINC01238-205ENST00000567549 1107 ntBASIC17.7■□□□□ 0.42
CCND1P24385 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms