Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP8P22894 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.45■□□□□ 0.54
MMP8P22894 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP8P22894 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.45■□□□□ 0.54
MMP8P22894 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
MMP8P22894 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
MMP8P22894 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.45■□□□□ 0.54
MMP8P22894 AC093458.2-201ENST00000623150 629 ntBASIC18.45■□□□□ 0.54
MMP8P22894 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.45■□□□□ 0.54
MMP8P22894 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
MMP8P22894 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 AC012313.1-201ENST00000593393 3059 ntBASIC18.45■□□□□ 0.54
MMP8P22894 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 HTR7P1-202ENST00000624664 4411 ntBASIC18.45■□□□□ 0.54
MMP8P22894 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP8P22894 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MMP8P22894 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MMP8P22894 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP8P22894 AC106820.2-201ENST00000563775 3264 ntBASIC18.44■□□□□ 0.54
MMP8P22894 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 SLC25A1P3-201ENST00000395415 828 ntBASIC18.44■□□□□ 0.54
MMP8P22894 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.44■□□□□ 0.54
MMP8P22894 UPK3BP1-201ENST00000428678 509 ntBASIC18.44■□□□□ 0.54
MMP8P22894 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP8P22894 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP8P22894 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP8P22894 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP8P22894 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP8P22894 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP8P22894 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP8P22894 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP8P22894 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
MMP8P22894 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MMP8P22894 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.43■□□□□ 0.54
MMP8P22894 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.43■□□□□ 0.54
MMP8P22894 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.43■□□□□ 0.54
MMP8P22894 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 AC099336.1-202ENST00000602961 463 ntBASIC18.43■□□□□ 0.54
MMP8P22894 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP8P22894 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MMP8P22894 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP8P22894 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 AC009336.1-201ENST00000608941 1553 ntBASIC18.42■□□□□ 0.54
MMP8P22894 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MMP8P22894 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.42■□□□□ 0.54
MMP8P22894 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
MMP8P22894 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MMP8P22894 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
MMP8P22894 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP8P22894 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP8P22894 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.42■□□□□ 0.54
MMP8P22894 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms