Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB4AP20338 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB4AP20338 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAB4AP20338 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
RAB4AP20338 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RAB4AP20338 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB4AP20338 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.48□□□□□ -0.25
RAB4AP20338 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
RAB4AP20338 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.48□□□□□ -0.25
RAB4AP20338 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB4AP20338 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB4AP20338 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB4AP20338 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
RAB4AP20338 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RAB4AP20338 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAB4AP20338 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 KRT8P32-201ENST00000512863 1461 ntBASIC13.48□□□□□ -0.25
RAB4AP20338 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
RAB4AP20338 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB4AP20338 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB4AP20338 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB4AP20338 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB4AP20338 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB4AP20338 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB4AP20338 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 AC006116.8-202ENST00000587620 1550 ntBASIC13.47□□□□□ -0.25
RAB4AP20338 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RAB4AP20338 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 AGGF1P2-201ENST00000426656 2106 ntBASIC13.47□□□□□ -0.25
RAB4AP20338 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.47□□□□□ -0.25
RAB4AP20338 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB4AP20338 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.47□□□□□ -0.25
RAB4AP20338 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.47□□□□□ -0.25
RAB4AP20338 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB4AP20338 AL357033.4-201ENST00000617703 1807 ntBASIC13.47□□□□□ -0.25
RAB4AP20338 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms