Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC3P19447 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ERCC3P19447 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC3P19447 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC3P19447 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 AC022898.2-201ENST00000616822 1312 ntBASIC20.29■□□□□ 0.84
ERCC3P19447 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 SIRPAP1-201ENST00000448467 1770 ntBASIC20.29■□□□□ 0.84
ERCC3P19447 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ERCC3P19447 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.29■□□□□ 0.84
ERCC3P19447 AC023274.1-201ENST00000418278 595 ntBASIC20.29■□□□□ 0.84
ERCC3P19447 AC004832.2-201ENST00000426397 482 ntBASIC20.29■□□□□ 0.84
ERCC3P19447 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
ERCC3P19447 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.29■□□□□ 0.84
ERCC3P19447 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 PGM5P2-202ENST00000637225 1043 ntBASIC20.29■□□□□ 0.84
ERCC3P19447 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ERCC3P19447 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.29■□□□□ 0.84
ERCC3P19447 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ERCC3P19447 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC3P19447 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ERCC3P19447 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 RPS8P6-201ENST00000426177 609 ntBASIC20.28■□□□□ 0.84
ERCC3P19447 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 AC108751.1-201ENST00000490852 363 ntBASIC20.28■□□□□ 0.84
ERCC3P19447 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.28■□□□□ 0.84
ERCC3P19447 AC136632.2-201ENST00000512891 861 ntBASIC20.28■□□□□ 0.84
ERCC3P19447 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.28■□□□□ 0.84
ERCC3P19447 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.28■□□□□ 0.84
ERCC3P19447 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.28■□□□□ 0.84
ERCC3P19447 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 AC064836.3-201ENST00000607928 673 ntBASIC20.28■□□□□ 0.84
ERCC3P19447 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.28■□□□□ 0.84
ERCC3P19447 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC3P19447 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ERCC3P19447 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ERCC3P19447 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ERCC3P19447 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ERCC3P19447 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.27■□□□□ 0.84
ERCC3P19447 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms