Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC20.93■□□□□ 0.94
NCLP19338 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCLP19338 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.92■□□□□ 0.94
NCLP19338 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
NCLP19338 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
NCLP19338 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.92■□□□□ 0.94
NCLP19338 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.92■□□□□ 0.94
NCLP19338 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NCLP19338 AL590326.2-201ENST00000625139 305 ntBASIC20.92■□□□□ 0.94
NCLP19338 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.92■□□□□ 0.94
NCLP19338 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NCLP19338 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.92■□□□□ 0.94
NCLP19338 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.92■□□□□ 0.94
NCLP19338 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NCLP19338 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NCLP19338 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NCLP19338 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLP19338 AC046158.3-201ENST00000624947 2558 ntBASIC20.92■□□□□ 0.94
NCLP19338 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCLP19338 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCLP19338 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
NCLP19338 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCLP19338 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCLP19338 HMGA1P5-201ENST00000412453 271 ntBASIC20.91■□□□□ 0.94
NCLP19338 CROCCP2-202ENST00000412962 2773 ntBASIC20.91■□□□□ 0.94
NCLP19338 AC104076.2-201ENST00000448912 469 ntBASIC20.91■□□□□ 0.94
NCLP19338 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NCLP19338 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.91■□□□□ 0.94
NCLP19338 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.91■□□□□ 0.94
NCLP19338 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NCLP19338 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
NCLP19338 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.91■□□□□ 0.94
NCLP19338 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NCLP19338 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NCLP19338 AL023803.3-201ENST00000615559 522 ntBASIC20.91■□□□□ 0.94
NCLP19338 AC010653.2-201ENST00000623505 997 ntBASIC20.91■□□□□ 0.94
NCLP19338 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.91■□□□□ 0.94
NCLP19338 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
NCLP19338 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NCLP19338 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.9■□□□□ 0.94
NCLP19338 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.9■□□□□ 0.94
NCLP19338 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.9■□□□□ 0.94
NCLP19338 AL024508.2-201ENST00000607749 1894 ntBASIC20.9■□□□□ 0.94
NCLP19338 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.9■□□□□ 0.94
NCLP19338 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
NCLP19338 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 AC092338.2-201ENST00000568827 1415 ntBASIC20.9■□□□□ 0.94
NCLP19338 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.9■□□□□ 0.94
NCLP19338 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.9■□□□□ 0.94
NCLP19338 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.9■□□□□ 0.94
NCLP19338 AC007663.1-201ENST00000438948 1240 ntBASIC20.9■□□□□ 0.94
NCLP19338 ATP5G1P1-201ENST00000448724 379 ntBASIC20.9■□□□□ 0.94
NCLP19338 KRT18P35-201ENST00000510488 1269 ntBASIC20.9■□□□□ 0.94
NCLP19338 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NCLP19338 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCLP19338 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NCLP19338 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCLP19338 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.89■□□□□ 0.94
NCLP19338 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NCLP19338 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
NCLP19338 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.89■□□□□ 0.94
NCLP19338 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NCLP19338 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCLP19338 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCLP19338 KRT8P7-201ENST00000533003 1432 ntBASIC20.89■□□□□ 0.94
NCLP19338 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.89■□□□□ 0.93
NCLP19338 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCLP19338 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NCLP19338 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms