Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC104819.1-201ENST00000504587 486 ntBASIC17.69■□□□□ 0.42
VCLP18206 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.69■□□□□ 0.42
VCLP18206 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
VCLP18206 AC012615.1-201ENST00000565797 1299 ntBASIC17.69■□□□□ 0.42
VCLP18206 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.69■□□□□ 0.42
VCLP18206 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.69■□□□□ 0.42
VCLP18206 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.69■□□□□ 0.42
VCLP18206 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VCLP18206 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VCLP18206 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 AC233702.3-201ENST00000578656 1387 ntBASIC17.68■□□□□ 0.42
VCLP18206 KRT18P55-202ENST00000578578 1546 ntBASIC17.68■□□□□ 0.42
VCLP18206 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 AC046158.3-201ENST00000624947 2558 ntBASIC17.68■□□□□ 0.42
VCLP18206 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VCLP18206 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.68■□□□□ 0.42
VCLP18206 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.68■□□□□ 0.42
VCLP18206 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.68■□□□□ 0.42
VCLP18206 DUTP2-201ENST00000519164 463 ntBASIC17.68■□□□□ 0.42
VCLP18206 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.68■□□□□ 0.42
VCLP18206 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.68■□□□□ 0.42
VCLP18206 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.68■□□□□ 0.42
VCLP18206 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 PRELID1P1-202ENST00000567272 903 ntBASIC17.68■□□□□ 0.42
VCLP18206 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.68■□□□□ 0.42
VCLP18206 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VCLP18206 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.68■□□□□ 0.42
VCLP18206 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.68■□□□□ 0.42
VCLP18206 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.68■□□□□ 0.42
VCLP18206 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.68■□□□□ 0.42
VCLP18206 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.68■□□□□ 0.42
VCLP18206 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.68■□□□□ 0.42
VCLP18206 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
VCLP18206 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCLP18206 AC132938.6-201ENST00000623828 1655 ntBASIC17.67■□□□□ 0.42
VCLP18206 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VCLP18206 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.67■□□□□ 0.42
VCLP18206 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VCLP18206 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.67■□□□□ 0.42
VCLP18206 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.67■□□□□ 0.42
VCLP18206 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.67■□□□□ 0.42
VCLP18206 MTCL1P1-201ENST00000446207 792 ntBASIC17.67■□□□□ 0.42
VCLP18206 AC068472.1-201ENST00000474589 881 ntBASIC17.67■□□□□ 0.42
VCLP18206 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VCLP18206 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
VCLP18206 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.67■□□□□ 0.42
VCLP18206 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.67■□□□□ 0.42
VCLP18206 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.67■□□□□ 0.42
VCLP18206 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.67■□□□□ 0.42
VCLP18206 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.67■□□□□ 0.42
VCLP18206 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.67■□□□□ 0.42
VCLP18206 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.67■□□□□ 0.42
VCLP18206 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCLP18206 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VCLP18206 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
VCLP18206 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.67■□□□□ 0.42
VCLP18206 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.66■□□□□ 0.42
VCLP18206 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
VCLP18206 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VCLP18206 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms