Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PTPN1P18031 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN1P18031 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN1P18031 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN1P18031 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PTPN1P18031 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PTPN1P18031 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN1P18031 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN1P18031 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN1P18031 AL031284.1-201ENST00000419297 478 ntBASIC18.58■□□□□ 0.56
PTPN1P18031 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN1P18031 RPS2P1-201ENST00000434010 821 ntBASIC18.58■□□□□ 0.56
PTPN1P18031 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PTPN1P18031 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN1P18031 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN1P18031 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN1P18031 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.58■□□□□ 0.56
PTPN1P18031 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN1P18031 AC009336.1-201ENST00000608941 1553 ntBASIC18.58■□□□□ 0.56
PTPN1P18031 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PTPN1P18031 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN1P18031 AL133373.2-201ENST00000623187 2828 ntBASIC18.58■□□□□ 0.56
PTPN1P18031 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN1P18031 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN1P18031 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 AC134043.2-201ENST00000624206 2238 ntBASIC18.57■□□□□ 0.56
PTPN1P18031 NOC2LP2-201ENST00000407594 1944 ntBASIC18.57■□□□□ 0.56
PTPN1P18031 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN1P18031 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 HLA-J-201ENST00000462773 1622 ntBASIC18.57■□□□□ 0.56
PTPN1P18031 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTPN1P18031 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN1P18031 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTPN1P18031 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTPN1P18031 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 SIGLEC30P-201ENST00000455569 941 ntBASIC18.57■□□□□ 0.56
PTPN1P18031 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPN1P18031 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN1P18031 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.57■□□□□ 0.56
PTPN1P18031 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPN1P18031 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN1P18031 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN1P18031 AP001005.1-201ENST00000571755 1248 ntBASIC18.57■□□□□ 0.56
PTPN1P18031 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN1P18031 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTPN1P18031 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTPN1P18031 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN1P18031 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN1P18031 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN1P18031 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN1P18031 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN1P18031 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN1P18031 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PTPN1P18031 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTPN1P18031 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.56■□□□□ 0.56
PTPN1P18031 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTPN1P18031 AC079776.4-201ENST00000511039 504 ntBASIC18.56■□□□□ 0.56
PTPN1P18031 OR7E14P-202ENST00000530490 1290 ntBASIC18.56■□□□□ 0.56
PTPN1P18031 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN1P18031 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN1P18031 FAM215A-202ENST00000632077 792 ntBASIC18.56■□□□□ 0.56
PTPN1P18031 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTPN1P18031 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN1P18031 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN1P18031 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN1P18031 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN1P18031 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN1P18031 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN1P18031 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN1P18031 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN1P18031 AC133963.1-201ENST00000504166 1679 ntBASIC18.55■□□□□ 0.56
PTPN1P18031 RPS2P28-201ENST00000314255 741 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms