Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 AL139400.1-201ENST00000366220 510 ntBASIC19.41■□□□□ 0.7
SMPD1P17405 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.41■□□□□ 0.7
SMPD1P17405 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.41■□□□□ 0.7
SMPD1P17405 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.41■□□□□ 0.7
SMPD1P17405 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.41■□□□□ 0.7
SMPD1P17405 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.41■□□□□ 0.7
SMPD1P17405 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMPD1P17405 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.41■□□□□ 0.7
SMPD1P17405 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.41■□□□□ 0.7
SMPD1P17405 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.41■□□□□ 0.7
SMPD1P17405 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.41■□□□□ 0.7
SMPD1P17405 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.41■□□□□ 0.7
SMPD1P17405 ACTL9-202ENST00000612068 1252 ntBASIC19.41■□□□□ 0.7
SMPD1P17405 AC106028.4-201ENST00000614509 607 ntBASIC19.41■□□□□ 0.7
SMPD1P17405 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMPD1P17405 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 AC092919.2-201ENST00000623631 1645 ntBASIC19.4■□□□□ 0.7
SMPD1P17405 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.4■□□□□ 0.7
SMPD1P17405 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SMPD1P17405 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 PAWRP1-201ENST00000451083 565 ntBASIC19.4■□□□□ 0.7
SMPD1P17405 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.4■□□□□ 0.7
SMPD1P17405 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD1P17405 AC068137.2-201ENST00000605408 478 ntBASIC19.4■□□□□ 0.7
SMPD1P17405 AC104581.1-202ENST00000635932 2618 ntBASIC19.4■□□□□ 0.7
SMPD1P17405 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SMPD1P17405 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SMPD1P17405 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.4■□□□□ 0.7
SMPD1P17405 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD1P17405 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMPD1P17405 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMPD1P17405 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMPD1P17405 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.39■□□□□ 0.7
SMPD1P17405 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMPD1P17405 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.39■□□□□ 0.69
SMPD1P17405 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SMPD1P17405 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.39■□□□□ 0.69
SMPD1P17405 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.39■□□□□ 0.69
SMPD1P17405 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.39■□□□□ 0.69
SMPD1P17405 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 AC093028.1-201ENST00000622998 982 ntBASIC19.39■□□□□ 0.69
SMPD1P17405 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.39■□□□□ 0.69
SMPD1P17405 AL513210.1-201ENST00000629608 234 ntBASIC19.39■□□□□ 0.69
SMPD1P17405 AC105339.1-204ENST00000636249 355 ntBASIC19.39■□□□□ 0.69
SMPD1P17405 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SMPD1P17405 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SMPD1P17405 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD1P17405 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms