Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC172P0C7W6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC172P0C7W6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC172P0C7W6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC172P0C7W6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC172P0C7W6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CCDC172P0C7W6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC172P0C7W6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC172P0C7W6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 CROCCP2-202ENST00000412962 2773 ntBASIC19.01■□□□□ 0.63
CCDC172P0C7W6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 AC005104.2-201ENST00000427818 678 ntBASIC19.01■□□□□ 0.63
CCDC172P0C7W6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 AC112907.2-201ENST00000448639 330 ntBASIC19.01■□□□□ 0.63
CCDC172P0C7W6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 LINC01023-201ENST00000606054 436 ntBASIC19.01■□□□□ 0.63
CCDC172P0C7W6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC172P0C7W6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 AC016396.2-201ENST00000562575 1417 ntBASIC19■□□□□ 0.63
CCDC172P0C7W6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19■□□□□ 0.63
CCDC172P0C7W6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19■□□□□ 0.63
CCDC172P0C7W6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19■□□□□ 0.63
CCDC172P0C7W6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19■□□□□ 0.63
CCDC172P0C7W6 AC005332.3-201ENST00000589904 676 ntBASIC19■□□□□ 0.63
CCDC172P0C7W6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19■□□□□ 0.63
CCDC172P0C7W6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19■□□□□ 0.63
CCDC172P0C7W6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19■□□□□ 0.63
CCDC172P0C7W6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19■□□□□ 0.63
CCDC172P0C7W6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC172P0C7W6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC172P0C7W6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms