Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.72■□□□□ 0.75
TPM3P06753 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 AC010240.3-201ENST00000607688 395 ntBASIC19.72■□□□□ 0.75
TPM3P06753 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.72■□□□□ 0.75
TPM3P06753 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM3P06753 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
TPM3P06753 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 AC060834.1-201ENST00000443027 2032 ntBASIC19.71■□□□□ 0.75
TPM3P06753 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM3P06753 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TPM3P06753 CCR12P-201ENST00000446203 998 ntBASIC19.71■□□□□ 0.75
TPM3P06753 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.71■□□□□ 0.75
TPM3P06753 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.71■□□□□ 0.75
TPM3P06753 AL023803.3-201ENST00000615559 522 ntBASIC19.71■□□□□ 0.75
TPM3P06753 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TPM3P06753 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TPM3P06753 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
TPM3P06753 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM3P06753 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM3P06753 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
TPM3P06753 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM3P06753 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TPM3P06753 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TPM3P06753 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TPM3P06753 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM3P06753 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.7■□□□□ 0.74
TPM3P06753 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.7■□□□□ 0.74
TPM3P06753 REXO1L10P-201ENST00000615707 1290 ntBASIC19.7■□□□□ 0.74
TPM3P06753 REXO1L12P-201ENST00000622156 912 ntBASIC19.7■□□□□ 0.74
TPM3P06753 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TPM3P06753 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TPM3P06753 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.7■□□□□ 0.74
TPM3P06753 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM3P06753 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TPM3P06753 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.7■□□□□ 0.74
TPM3P06753 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.69■□□□□ 0.74
TPM3P06753 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TPM3P06753 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.69■□□□□ 0.74
TPM3P06753 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TPM3P06753 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 AL355355.2-201ENST00000442321 338 ntBASIC19.69■□□□□ 0.74
TPM3P06753 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 BX088651.1-201ENST00000540551 451 ntBASIC19.69■□□□□ 0.74
TPM3P06753 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TPM3P06753 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms