Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PLOD3O60568 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PLOD3O60568 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PLOD3O60568 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.58■□□□□ 0.24
PLOD3O60568 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 AL358472.4-201ENST00000633140 710 ntBASIC16.58■□□□□ 0.24
PLOD3O60568 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.58■□□□□ 0.24
PLOD3O60568 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.58■□□□□ 0.24
PLOD3O60568 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.58■□□□□ 0.24
PLOD3O60568 LINC00304-203ENST00000565008 1864 ntBASIC16.58■□□□□ 0.24
PLOD3O60568 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PLOD3O60568 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 AL355312.1-201ENST00000407115 2176 ntBASIC16.58■□□□□ 0.24
PLOD3O60568 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.58■□□□□ 0.24
PLOD3O60568 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PLOD3O60568 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PLOD3O60568 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PLOD3O60568 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.57■□□□□ 0.24
PLOD3O60568 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PLOD3O60568 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.57■□□□□ 0.24
PLOD3O60568 REXO1L11P-201ENST00000620964 1927 ntBASIC16.57■□□□□ 0.24
PLOD3O60568 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 AC125634.1-201ENST00000438758 1403 ntBASIC16.57■□□□□ 0.24
PLOD3O60568 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PLOD3O60568 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PLOD3O60568 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.57■□□□□ 0.24
PLOD3O60568 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.57■□□□□ 0.24
PLOD3O60568 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.57■□□□□ 0.24
PLOD3O60568 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PLOD3O60568 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PLOD3O60568 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PLOD3O60568 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PLOD3O60568 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PLOD3O60568 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.56■□□□□ 0.24
PLOD3O60568 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PLOD3O60568 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.56■□□□□ 0.24
PLOD3O60568 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PLOD3O60568 DRAXINP1-201ENST00000437611 948 ntBASIC16.56■□□□□ 0.24
PLOD3O60568 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.56■□□□□ 0.24
PLOD3O60568 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.56■□□□□ 0.24
PLOD3O60568 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.56■□□□□ 0.24
PLOD3O60568 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.56■□□□□ 0.24
PLOD3O60568 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.56■□□□□ 0.24
PLOD3O60568 AL138831.2-201ENST00000606564 490 ntBASIC16.56■□□□□ 0.24
PLOD3O60568 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.56■□□□□ 0.24
PLOD3O60568 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.56■□□□□ 0.24
PLOD3O60568 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.56■□□□□ 0.24
PLOD3O60568 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PLOD3O60568 HLA-J-201ENST00000462773 1622 ntBASIC16.56■□□□□ 0.24
PLOD3O60568 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.56■□□□□ 0.24
PLOD3O60568 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.56■□□□□ 0.24
PLOD3O60568 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms