Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 GNAS-203ENST00000306120 1878 ntBASIC21.21■□□□□ 0.99
GRIN3BO60391 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
GRIN3BO60391 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.21■□□□□ 0.99
GRIN3BO60391 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.2■□□□□ 0.99
GRIN3BO60391 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GRIN3BO60391 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GRIN3BO60391 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.2■□□□□ 0.98
GRIN3BO60391 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GRIN3BO60391 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GRIN3BO60391 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.2■□□□□ 0.98
GRIN3BO60391 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
GRIN3BO60391 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.2■□□□□ 0.98
GRIN3BO60391 AC112492.5-201ENST00000421897 457 ntBASIC21.2■□□□□ 0.98
GRIN3BO60391 AC022210.1-201ENST00000449856 793 ntBASIC21.2■□□□□ 0.98
GRIN3BO60391 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.2■□□□□ 0.98
GRIN3BO60391 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.2■□□□□ 0.98
GRIN3BO60391 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.2■□□□□ 0.98
GRIN3BO60391 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
GRIN3BO60391 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GRIN3BO60391 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.2■□□□□ 0.98
GRIN3BO60391 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GRIN3BO60391 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.2■□□□□ 0.98
GRIN3BO60391 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GRIN3BO60391 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
GRIN3BO60391 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
GRIN3BO60391 AC007541.1-201ENST00000570282 1469 ntBASIC21.2■□□□□ 0.98
GRIN3BO60391 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
GRIN3BO60391 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
GRIN3BO60391 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
GRIN3BO60391 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.19■□□□□ 0.98
GRIN3BO60391 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GRIN3BO60391 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
GRIN3BO60391 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.19■□□□□ 0.98
GRIN3BO60391 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.19■□□□□ 0.98
GRIN3BO60391 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.19■□□□□ 0.98
GRIN3BO60391 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.19■□□□□ 0.98
GRIN3BO60391 IGHV3-52-201ENST00000519770 353 ntBASIC21.19■□□□□ 0.98
GRIN3BO60391 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
GRIN3BO60391 API5-211ENST00000534695 560 ntTSL 5 BASIC21.19■□□□□ 0.98
GRIN3BO60391 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 MIR4453-201ENST00000584019 89 ntBASIC21.19■□□□□ 0.98
GRIN3BO60391 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
GRIN3BO60391 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GRIN3BO60391 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GRIN3BO60391 PKD1P6-201ENST00000343738 4769 ntBASIC21.19■□□□□ 0.98
GRIN3BO60391 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GRIN3BO60391 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GRIN3BO60391 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GRIN3BO60391 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.18■□□□□ 0.98
GRIN3BO60391 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 RN7SL752P-201ENST00000463779 287 ntBASIC21.18■□□□□ 0.98
GRIN3BO60391 AC011495.1-201ENST00000498085 584 ntBASIC21.18■□□□□ 0.98
GRIN3BO60391 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
GRIN3BO60391 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.18■□□□□ 0.98
GRIN3BO60391 AC104794.3-201ENST00000566840 1248 ntBASIC21.18■□□□□ 0.98
GRIN3BO60391 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.18■□□□□ 0.98
GRIN3BO60391 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.18■□□□□ 0.98
GRIN3BO60391 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.18■□□□□ 0.98
GRIN3BO60391 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GRIN3BO60391 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GRIN3BO60391 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GRIN3BO60391 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
GRIN3BO60391 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
GRIN3BO60391 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
GRIN3BO60391 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GRIN3BO60391 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
GRIN3BO60391 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GRIN3BO60391 AP006294.1-201ENST00000415407 339 ntBASIC21.17■□□□□ 0.98
GRIN3BO60391 HCG4-201ENST00000418983 998 ntBASIC21.17■□□□□ 0.98
GRIN3BO60391 ACTG1P4-201ENST00000425123 1122 ntBASIC21.17■□□□□ 0.98
GRIN3BO60391 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GRIN3BO60391 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.17■□□□□ 0.98
GRIN3BO60391 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.17■□□□□ 0.98
GRIN3BO60391 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.17■□□□□ 0.98
GRIN3BO60391 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
GRIN3BO60391 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.17■□□□□ 0.98
GRIN3BO60391 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.17■□□□□ 0.98
GRIN3BO60391 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.17■□□□□ 0.98
GRIN3BO60391 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.17■□□□□ 0.98
GRIN3BO60391 AL033527.4-201ENST00000641026 673 ntBASIC21.17■□□□□ 0.98
GRIN3BO60391 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GRIN3BO60391 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms