Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHMP2AO43633 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMP2AO43633 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP2AO43633 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 AC079776.4-201ENST00000511039 504 ntBASIC19.75■□□□□ 0.75
CHMP2AO43633 IGHV3-52-201ENST00000519770 353 ntBASIC19.75■□□□□ 0.75
CHMP2AO43633 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP2AO43633 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP2AO43633 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP2AO43633 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMP2AO43633 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHMP2AO43633 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP2AO43633 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP2AO43633 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP2AO43633 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 AC067852.2-201ENST00000590513 2313 ntBASIC19.75■□□□□ 0.75
CHMP2AO43633 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHMP2AO43633 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMP2AO43633 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP2AO43633 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CHMP2AO43633 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP2AO43633 KLF4P1-201ENST00000412782 1185 ntBASIC19.74■□□□□ 0.75
CHMP2AO43633 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 SLC25A6P5-201ENST00000435663 894 ntBASIC19.74■□□□□ 0.75
CHMP2AO43633 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP2AO43633 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHMP2AO43633 AF186996.4-201ENST00000467186 377 ntBASIC19.74■□□□□ 0.75
CHMP2AO43633 RNPS1P1-201ENST00000507437 918 ntBASIC19.74■□□□□ 0.75
CHMP2AO43633 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 AC073648.2-201ENST00000510116 352 ntBASIC19.74■□□□□ 0.75
CHMP2AO43633 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMP2AO43633 AC021087.4-201ENST00000563761 564 ntBASIC19.74■□□□□ 0.75
CHMP2AO43633 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP2AO43633 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP2AO43633 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHMP2AO43633 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2AO43633 AC068880.1-201ENST00000507289 2297 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 AC148477.5-201ENST00000625164 1645 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 AC079776.2-201ENST00000641154 1609 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHMP2AO43633 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 OR6D1P-202ENST00000641007 5290 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.73■□□□□ 0.75
CHMP2AO43633 SPDYE21P-201ENST00000413323 827 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP2AO43633 KRT18P67-201ENST00000432816 1264 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMP2AO43633 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.73■□□□□ 0.75
CHMP2AO43633 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP2AO43633 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP2AO43633 AL139288.1-201ENST00000623748 933 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMP2AO43633 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP2AO43633 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CHMP2AO43633 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP2AO43633 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CHMP2AO43633 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP2AO43633 PKD1P1-201ENST00000458669 6805 ntBASIC19.73■□□□□ 0.75
CHMP2AO43633 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2AO43633 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHMP2AO43633 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2AO43633 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2AO43633 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHMP2AO43633 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2AO43633 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms