Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK2O00526 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK2O00526 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK2O00526 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK2O00526 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK2O00526 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.1□□□□□ -0.15
UPK2O00526 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK2O00526 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 AC092647.4-201ENST00000457211 535 ntBASIC14.1□□□□□ -0.15
UPK2O00526 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
UPK2O00526 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK2O00526 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UPK2O00526 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK2O00526 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.1□□□□□ -0.15
UPK2O00526 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK2O00526 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
UPK2O00526 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.1□□□□□ -0.15
UPK2O00526 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK2O00526 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UPK2O00526 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK2O00526 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 Z83836.1-201ENST00000624605 1642 ntBASIC14.09□□□□□ -0.15
UPK2O00526 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK2O00526 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK2O00526 RNF126P1-202ENST00000569893 925 ntBASIC14.09□□□□□ -0.15
UPK2O00526 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.09□□□□□ -0.15
UPK2O00526 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
UPK2O00526 AC006011.2-201ENST00000621313 1158 ntBASIC14.09□□□□□ -0.15
UPK2O00526 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 AC116353.5-201ENST00000638148 1699 ntBASIC14.09□□□□□ -0.15
UPK2O00526 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UPK2O00526 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UPK2O00526 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK2O00526 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
UPK2O00526 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UPK2O00526 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
UPK2O00526 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK2O00526 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK2O00526 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK2O00526 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms