Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX39AO00148 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX39AO00148 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
DDX39AO00148 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX39AO00148 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX39AO00148 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
DDX39AO00148 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
DDX39AO00148 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX39AO00148 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 NOC2LP1-202ENST00000452600 2235 ntBASIC19.75■□□□□ 0.75
DDX39AO00148 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX39AO00148 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.75■□□□□ 0.75
DDX39AO00148 AL022342.1-201ENST00000400363 863 ntBASIC19.75■□□□□ 0.75
DDX39AO00148 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX39AO00148 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
DDX39AO00148 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX39AO00148 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
DDX39AO00148 AC012640.2-201ENST00000561606 901 ntBASIC19.75■□□□□ 0.75
DDX39AO00148 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
DDX39AO00148 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX39AO00148 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
DDX39AO00148 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX39AO00148 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX39AO00148 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 RNF165-205ENST00000588679 2904 ntBASIC19.75■□□□□ 0.75
DDX39AO00148 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
DDX39AO00148 FZD10-202ENST00000539839 3282 ntBASIC19.75■□□□□ 0.75
DDX39AO00148 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX39AO00148 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.74■□□□□ 0.75
DDX39AO00148 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.74■□□□□ 0.75
DDX39AO00148 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
DDX39AO00148 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
DDX39AO00148 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
DDX39AO00148 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
DDX39AO00148 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 AL020989.1-201ENST00000422979 469 ntBASIC19.74■□□□□ 0.75
DDX39AO00148 AC093909.1-201ENST00000504731 1122 ntBASIC19.74■□□□□ 0.75
DDX39AO00148 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.74■□□□□ 0.75
DDX39AO00148 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.74■□□□□ 0.75
DDX39AO00148 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.74■□□□□ 0.75
DDX39AO00148 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.74■□□□□ 0.75
DDX39AO00148 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
DDX39AO00148 AL022326.1-202ENST00000641533 845 ntBASIC19.74■□□□□ 0.75
DDX39AO00148 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
DDX39AO00148 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX39AO00148 AC006116.8-202ENST00000587620 1550 ntBASIC19.74■□□□□ 0.75
DDX39AO00148 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
DDX39AO00148 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.74■□□□□ 0.75
DDX39AO00148 IL9RP2-201ENST00000423948 1312 ntBASIC19.74■□□□□ 0.75
DDX39AO00148 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX39AO00148 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
DDX39AO00148 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX39AO00148 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 STK19B-204ENST00000512515 211 ntBASIC19.73■□□□□ 0.75
DDX39AO00148 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.73■□□□□ 0.75
DDX39AO00148 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.73■□□□□ 0.75
DDX39AO00148 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.73■□□□□ 0.75
DDX39AO00148 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.73■□□□□ 0.75
DDX39AO00148 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX39AO00148 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.73■□□□□ 0.75
DDX39AO00148 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms