Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KRT18P41-201ENST00000518924 1277 ntBASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 AL121672.3-201ENST00000608644 468 ntBASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 LINC00602-201ENST00000629776 2065 ntBASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDX49Q9Y6V7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDX49Q9Y6V7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DDX49Q9Y6V7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 TSPY22P-201ENST00000427496 604 ntBASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 AC104390.1-201ENST00000555663 520 ntBASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 MIR3652-201ENST00000579335 131 ntBASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX49Q9Y6V7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX49Q9Y6V7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX49Q9Y6V7 Z83836.1-201ENST00000624605 1642 ntBASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms