Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 HLA-J-201ENST00000462773 1622 ntBASIC17.68■□□□□ 0.42
PKP3Q9Y446 TP73-AS1-210ENST00000637775 1455 ntBASIC17.68■□□□□ 0.42
PKP3Q9Y446 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 AC122714.2-201ENST00000502787 707 ntBASIC17.67■□□□□ 0.42
PKP3Q9Y446 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 AC099336.1-202ENST00000602961 463 ntBASIC17.67■□□□□ 0.42
PKP3Q9Y446 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 OR6D1P-203ENST00000641209 4860 ntBASIC17.67■□□□□ 0.42
PKP3Q9Y446 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP3Q9Y446 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP3Q9Y446 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.66■□□□□ 0.42
PKP3Q9Y446 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.66■□□□□ 0.42
PKP3Q9Y446 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PKP3Q9Y446 FZD10-202ENST00000539839 3282 ntBASIC17.66■□□□□ 0.42
PKP3Q9Y446 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.66■□□□□ 0.42
PKP3Q9Y446 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 POM121L3P-201ENST00000419331 1163 ntBASIC17.66■□□□□ 0.42
PKP3Q9Y446 AC103564.2-201ENST00000432853 1299 ntBASIC17.66■□□□□ 0.42
PKP3Q9Y446 MIR3652-201ENST00000579335 131 ntBASIC17.66■□□□□ 0.42
PKP3Q9Y446 AC011467.2-201ENST00000598425 242 ntBASIC17.66■□□□□ 0.42
PKP3Q9Y446 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PKP3Q9Y446 LINC00896-202ENST00000609602 2128 ntBASIC17.66■□□□□ 0.42
PKP3Q9Y446 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PKP3Q9Y446 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.66■□□□□ 0.42
PKP3Q9Y446 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP3Q9Y446 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 AC005104.2-201ENST00000427818 678 ntBASIC17.65■□□□□ 0.42
PKP3Q9Y446 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 BNIP3P18-201ENST00000593976 575 ntBASIC17.65■□□□□ 0.42
PKP3Q9Y446 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP3Q9Y446 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP3Q9Y446 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms