Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 MIR4674-201ENST00000582457 87 ntBASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 AC008556.1-201ENST00000610908 2040 ntBASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 FLJ13224-201ENST00000313737 1514 ntBASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 RCN1P1-201ENST00000400413 996 ntBASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 COX11P1-201ENST00000489116 835 ntBASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 WWOX-216ENST00000569818 525 ntBASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 RN7SL850P-201ENST00000579959 291 ntBASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HCC1Q9Y3T6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 HEIH-201ENST00000623091 1652 ntBASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 AC009947.2-201ENST00000444014 672 ntBASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HCC1Q9Y3T6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms