Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF11Q9Y3C5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CROCCP2-202ENST00000412962 2773 ntBASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 DUX4L26-201ENST00000489078 1255 ntBASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF11Q9Y3C5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 AL671277.2-201ENST00000458060 996 ntBASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF11Q9Y3C5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 TMPOP1-202ENST00000424642 1267 ntBASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF11Q9Y3C5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms