Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 INTS4P1-201ENST00000438455 1935 ntBASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA1Q9UND3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 AC008764.6-201ENST00000595909 2069 ntBASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 FGFR3P6-201ENST00000457012 610 ntBASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 SCARNA2-201ENST00000458748 420 ntBASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA1Q9UND3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 AC068880.1-201ENST00000507289 2297 ntBASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 SLC25A1P1-201ENST00000528351 927 ntBASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 AC011467.2-201ENST00000598425 242 ntBASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 GPALPP1-207ENST00000611650 899 ntBASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPA1Q9UND3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms