Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 NSUN5P1-202ENST00000421140 1535 ntBASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 NSUN5P2-203ENST00000457352 1529 ntBASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC099398.1-201ENST00000567919 2776 ntBASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AL645608.8-201ENST00000606034 2086 ntBASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 SAPCD2P3-201ENST00000455031 850 ntBASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC009078.2-202ENST00000463353 338 ntBASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC113404.2-201ENST00000507884 177 ntBASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AP002469.2-201ENST00000531724 424 ntBASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
NCKIPSDQ9NZQ3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCKIPSDQ9NZQ3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCKIPSDQ9NZQ3 AC079781.3-201ENST00000449110 356 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms