Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MKS1Q9NXB0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 COX5BP2-201ENST00000392354 334 ntBASIC17.35■□□□□ 0.37
MKS1Q9NXB0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 MTCL1P1-201ENST00000446207 792 ntBASIC17.35■□□□□ 0.37
MKS1Q9NXB0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 AC141257.4-201ENST00000634557 245 ntBASIC17.35■□□□□ 0.37
MKS1Q9NXB0 AC136944.6-201ENST00000634818 245 ntBASIC17.35■□□□□ 0.37
MKS1Q9NXB0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MKS1Q9NXB0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MKS1Q9NXB0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.33■□□□□ 0.37
MKS1Q9NXB0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MKS1Q9NXB0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.33■□□□□ 0.36
MKS1Q9NXB0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MKS1Q9NXB0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MKS1Q9NXB0 IGHGP-201ENST00000390555 1178 ntBASIC17.33■□□□□ 0.36
MKS1Q9NXB0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms