Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC25.03■■□□□ 1.6
SCAF11Q99590 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF11Q99590 CNN2P2-201ENST00000443536 909 ntBASIC25.03■■□□□ 1.6
SCAF11Q99590 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
SCAF11Q99590 CNN2P3-201ENST00000450201 906 ntBASIC25.03■■□□□ 1.6
SCAF11Q99590 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC25.03■■□□□ 1.6
SCAF11Q99590 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC25.03■■□□□ 1.6
SCAF11Q99590 AL136317.3-201ENST00000618497 906 ntBASIC25.03■■□□□ 1.6
SCAF11Q99590 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC25.03■■□□□ 1.6
SCAF11Q99590 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF11Q99590 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF11Q99590 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF11Q99590 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF11Q99590 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC25.03■■□□□ 1.6
SCAF11Q99590 AL355306.1-201ENST00000415580 579 ntBASIC25.02■■□□□ 1.6
SCAF11Q99590 TERF1P3-201ENST00000505638 1227 ntBASIC25.02■■□□□ 1.6
SCAF11Q99590 AC112191.1-201ENST00000523689 701 ntBASIC25.02■■□□□ 1.6
SCAF11Q99590 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 VPS29-207ENST00000549970 818 ntTSL 3 BASIC25.02■■□□□ 1.6
SCAF11Q99590 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SCAF11Q99590 AC099522.2-201ENST00000607001 744 ntBASIC25.02■■□□□ 1.6
SCAF11Q99590 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC25.02■■□□□ 1.6
SCAF11Q99590 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
SCAF11Q99590 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
SCAF11Q99590 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SCAF11Q99590 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
SCAF11Q99590 AC087289.5-201ENST00000586076 3175 ntBASIC25.02■■□□□ 1.6
SCAF11Q99590 BSG-215ENST00000618006 1329 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF11Q99590 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 AC009113.1-201ENST00000570267 2443 ntBASIC25.02■■□□□ 1.6
SCAF11Q99590 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
SCAF11Q99590 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SCAF11Q99590 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC25.02■■□□□ 1.6
SCAF11Q99590 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF11Q99590 TIMM8BP1-201ENST00000452384 211 ntBASIC25.02■■□□□ 1.6
SCAF11Q99590 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC25.02■■□□□ 1.6
SCAF11Q99590 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF11Q99590 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF11Q99590 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC25.02■■□□□ 1.6
SCAF11Q99590 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC25.02■■□□□ 1.6
SCAF11Q99590 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
SCAF11Q99590 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC25.01■■□□□ 1.59
SCAF11Q99590 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC25.01■■□□□ 1.59
SCAF11Q99590 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC25.01■■□□□ 1.59
SCAF11Q99590 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC25.01■■□□□ 1.59
SCAF11Q99590 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC25.01■■□□□ 1.59
SCAF11Q99590 AC007274.1-201ENST00000439805 662 ntBASIC25.01■■□□□ 1.59
SCAF11Q99590 GAPDHP21-201ENST00000450301 1010 ntBASIC25.01■■□□□ 1.59
SCAF11Q99590 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC25.01■■□□□ 1.59
SCAF11Q99590 RN7SL204P-201ENST00000582831 262 ntBASIC25.01■■□□□ 1.59
SCAF11Q99590 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC25.01■■□□□ 1.59
SCAF11Q99590 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC25.01■■□□□ 1.59
SCAF11Q99590 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCAF11Q99590 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC25■■□□□ 1.59
SCAF11Q99590 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC25■■□□□ 1.59
SCAF11Q99590 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SCAF11Q99590 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SCAF11Q99590 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC25■■□□□ 1.59
SCAF11Q99590 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC25■■□□□ 1.59
SCAF11Q99590 LINC00982-205ENST00000420957 435 ntBASIC25■■□□□ 1.59
SCAF11Q99590 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SCAF11Q99590 REXO1L9P-201ENST00000604264 2108 ntBASIC25■■□□□ 1.59
SCAF11Q99590 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 ACTL9-202ENST00000612068 1252 ntBASIC25■■□□□ 1.59
SCAF11Q99590 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC25■■□□□ 1.59
SCAF11Q99590 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SCAF11Q99590 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC25■■□□□ 1.59
SCAF11Q99590 AC009336.1-201ENST00000608941 1553 ntBASIC25■■□□□ 1.59
SCAF11Q99590 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 AC097637.2-201ENST00000624096 1997 ntBASIC24.99■■□□□ 1.59
SCAF11Q99590 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC24.99■■□□□ 1.59
SCAF11Q99590 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
SCAF11Q99590 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.99■■□□□ 1.59
SCAF11Q99590 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC24.99■■□□□ 1.59
SCAF11Q99590 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms