Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 AC122714.2-201ENST00000502787 707 ntBASIC18.6■□□□□ 0.57
TRIM11Q96F44 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 AC011840.4-201ENST00000578471 627 ntBASIC18.6■□□□□ 0.57
TRIM11Q96F44 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 IGHV3-41-201ENST00000613121 348 ntBASIC18.6■□□□□ 0.57
TRIM11Q96F44 AL121956.5-201ENST00000625261 221 ntBASIC18.6■□□□□ 0.57
TRIM11Q96F44 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TRIM11Q96F44 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM11Q96F44 AL121761.2-201ENST00000598007 1648 ntBASIC18.6■□□□□ 0.57
TRIM11Q96F44 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM11Q96F44 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM11Q96F44 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM11Q96F44 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM11Q96F44 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM11Q96F44 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM11Q96F44 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM11Q96F44 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM11Q96F44 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM11Q96F44 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM11Q96F44 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM11Q96F44 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 AC246785.2-201ENST00000432512 513 ntBASIC18.58■□□□□ 0.56
TRIM11Q96F44 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 AL138831.2-201ENST00000606564 490 ntBASIC18.58■□□□□ 0.56
TRIM11Q96F44 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.58■□□□□ 0.56
TRIM11Q96F44 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
TRIM11Q96F44 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM11Q96F44 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM11Q96F44 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM11Q96F44 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms