Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.48■□□□□ 0.71
HPS3Q969F9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
HPS3Q969F9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
HPS3Q969F9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.48■□□□□ 0.71
HPS3Q969F9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.48■□□□□ 0.71
HPS3Q969F9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HPS3Q969F9 PCDHA12-202ENST00000613593 2588 ntBASIC19.48■□□□□ 0.71
HPS3Q969F9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
HPS3Q969F9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.48■□□□□ 0.71
HPS3Q969F9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS3Q969F9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HPS3Q969F9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.48■□□□□ 0.71
HPS3Q969F9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HPS3Q969F9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HPS3Q969F9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS3Q969F9 TP73-AS1-210ENST00000637775 1455 ntBASIC19.48■□□□□ 0.71
HPS3Q969F9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.47■□□□□ 0.71
HPS3Q969F9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HPS3Q969F9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.47■□□□□ 0.71
HPS3Q969F9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 AP001094.4-201ENST00000579008 2176 ntBASIC19.47■□□□□ 0.71
HPS3Q969F9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HPS3Q969F9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
HPS3Q969F9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HPS3Q969F9 ATP5G2P1-201ENST00000433580 426 ntBASIC19.47■□□□□ 0.71
HPS3Q969F9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.47■□□□□ 0.71
HPS3Q969F9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.47■□□□□ 0.71
HPS3Q969F9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 AL049757.1-201ENST00000616842 1596 ntBASIC19.47■□□□□ 0.71
HPS3Q969F9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.47■□□□□ 0.71
HPS3Q969F9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HPS3Q969F9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS3Q969F9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HPS3Q969F9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HPS3Q969F9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.46■□□□□ 0.71
HPS3Q969F9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HPS3Q969F9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 AC022211.2-201ENST00000585075 2527 ntBASIC19.46■□□□□ 0.71
HPS3Q969F9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 KRT8P10-201ENST00000450021 1447 ntBASIC19.46■□□□□ 0.71
HPS3Q969F9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.46■□□□□ 0.71
HPS3Q969F9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HPS3Q969F9 UPK3BP1-201ENST00000428678 509 ntBASIC19.46■□□□□ 0.71
HPS3Q969F9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.46■□□□□ 0.71
HPS3Q969F9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.46■□□□□ 0.71
HPS3Q969F9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.46■□□□□ 0.71
HPS3Q969F9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.46■□□□□ 0.71
HPS3Q969F9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.46■□□□□ 0.71
HPS3Q969F9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.46■□□□□ 0.71
HPS3Q969F9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HPS3Q969F9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HPS3Q969F9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
HPS3Q969F9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.46■□□□□ 0.71
HPS3Q969F9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS3Q969F9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.46■□□□□ 0.71
HPS3Q969F9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.45■□□□□ 0.7
HPS3Q969F9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
HPS3Q969F9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HPS3Q969F9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HPS3Q969F9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.45■□□□□ 0.7
HPS3Q969F9 RCN1P2-201ENST00000398357 915 ntBASIC19.45■□□□□ 0.7
HPS3Q969F9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS3Q969F9 MINOS1P3-201ENST00000457048 203 ntBASIC19.45■□□□□ 0.7
HPS3Q969F9 VENTXP7-201ENST00000475503 772 ntBASIC19.45■□□□□ 0.7
HPS3Q969F9 AC096582.2-201ENST00000510860 516 ntBASIC19.45■□□□□ 0.7
HPS3Q969F9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms