Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 AC148477.5-201ENST00000625164 1645 ntBASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 BX276092.7-203ENST00000637198 1536 ntBASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 AC026471.1-201ENST00000564629 3026 ntBASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 AC073621.1-201ENST00000392730 636 ntBASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 BX842568.4-201ENST00000421222 227 ntBASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 PGAM5P1-201ENST00000518923 814 ntBASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 AL589182.2-201ENST00000619332 1049 ntBASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 AC005593.1-201ENST00000624894 515 ntBASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SH3RF2Q8TEC5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.21■□□□□ 0.5
SH3RF2Q8TEC5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 NOC2LP2-201ENST00000407594 1944 ntBASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 AC003669.1-201ENST00000334569 611 ntBASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 AL591424.1-201ENST00000442569 1213 ntBASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 AC009947.1-201ENST00000444350 727 ntBASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3RF2Q8TEC5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 KRT18P3-201ENST00000451602 1288 ntBASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AC136632.2-201ENST00000512891 861 ntBASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3RF2Q8TEC5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms