Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 AC092119.3-201ENST00000612618 583 ntBASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 TPM4P1-201ENST00000436100 807 ntBASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 AC069148.1-201ENST00000608741 768 ntBASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.59■□□□□ 0.25
SIMC1Q8NDZ2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
SIMC1Q8NDZ2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 TOB2P1-201ENST00000469761 992 ntBASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 AC011840.4-201ENST00000578471 627 ntBASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIMC1Q8NDZ2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.57■□□□□ 0.24
SIMC1Q8NDZ2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms