Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ARHGEF28Q8N1W1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
ARHGEF28Q8N1W1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 AC079781.4-201ENST00000641908 219 ntBASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.1■■□□□ 1.45
ARHGEF28Q8N1W1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 AL513210.1-201ENST00000629608 234 ntBASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC24.09■■□□□ 1.45
ARHGEF28Q8N1W1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
ARHGEF28Q8N1W1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
ARHGEF28Q8N1W1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
ARHGEF28Q8N1W1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC24.08■■□□□ 1.44
ARHGEF28Q8N1W1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
ARHGEF28Q8N1W1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
ARHGEF28Q8N1W1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
ARHGEF28Q8N1W1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 AC009093.7-201ENST00000623853 1223 ntBASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 AL139400.1-201ENST00000366220 510 ntBASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 PON3-203ENST00000427422 894 ntTSL 3 BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 AC140658.5-201ENST00000438532 169 ntBASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
ARHGEF28Q8N1W1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms