Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.07■□□□□ 0.64
VPS52Q8N1B4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 FAM220CP-201ENST00000395253 831 ntBASIC19.07■□□□□ 0.64
VPS52Q8N1B4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 MED15P5-201ENST00000423150 992 ntBASIC19.07■□□□□ 0.64
VPS52Q8N1B4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 RNA5SP415-201ENST00000517246 115 ntBASIC19.07■□□□□ 0.64
VPS52Q8N1B4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 AC034105.1-201ENST00000563488 319 ntBASIC19.07■□□□□ 0.64
VPS52Q8N1B4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 AL356488.2-201ENST00000602755 427 ntBASIC19.07■□□□□ 0.64
VPS52Q8N1B4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS52Q8N1B4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.06■□□□□ 0.64
VPS52Q8N1B4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 AC007967.3-201ENST00000434308 558 ntBASIC19.06■□□□□ 0.64
VPS52Q8N1B4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 Z83851.2-201ENST00000609564 659 ntBASIC19.06■□□□□ 0.64
VPS52Q8N1B4 FAM197Y3-203ENST00000618346 717 ntBASIC19.06■□□□□ 0.64
VPS52Q8N1B4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 AP000867.4-201ENST00000641616 219 ntBASIC19.06■□□□□ 0.64
VPS52Q8N1B4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS52Q8N1B4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 AC107918.4-202ENST00000641623 219 ntBASIC19.05■□□□□ 0.64
VPS52Q8N1B4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 ABALON-201ENST00000629058 1903 ntBASIC19.05■□□□□ 0.64
VPS52Q8N1B4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
VPS52Q8N1B4 AC132938.6-201ENST00000623828 1655 ntBASIC19.05■□□□□ 0.64
VPS52Q8N1B4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS52Q8N1B4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS52Q8N1B4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS52Q8N1B4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS52Q8N1B4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS52Q8N1B4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms