Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 TSPY17P-201ENST00000450329 467 ntBASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 NUDT16P1-203ENST00000513809 620 ntBASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 AGGF1P2-201ENST00000426656 2106 ntBASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 TSPY15P-201ENST00000457163 923 ntBASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 AL355075.4-201ENST00000554988 638 ntBASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 AC105020.1-201ENST00000435356 2205 ntBASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM42Q8IWZ5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 AP003041.3-201ENST00000527151 707 ntBASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM42Q8IWZ5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms