Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.49■□□□□ 0.39
APLFQ8IW19 TSSC2-201ENST00000450217 709 ntBASIC17.49■□□□□ 0.39
APLFQ8IW19 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.49■□□□□ 0.39
APLFQ8IW19 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.49■□□□□ 0.39
APLFQ8IW19 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.49■□□□□ 0.39
APLFQ8IW19 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.49■□□□□ 0.39
APLFQ8IW19 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
APLFQ8IW19 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
APLFQ8IW19 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
APLFQ8IW19 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
APLFQ8IW19 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.49■□□□□ 0.39
APLFQ8IW19 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.48■□□□□ 0.39
APLFQ8IW19 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.48■□□□□ 0.39
APLFQ8IW19 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.48■□□□□ 0.39
APLFQ8IW19 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.48■□□□□ 0.39
APLFQ8IW19 BX276092.5-203ENST00000456199 560 ntBASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
APLFQ8IW19 PRELID1P1-202ENST00000567272 903 ntBASIC17.48■□□□□ 0.39
APLFQ8IW19 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.48■□□□□ 0.39
APLFQ8IW19 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 PP12613-201ENST00000424958 2230 ntBASIC17.48■□□□□ 0.39
APLFQ8IW19 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 GPAT2P1-201ENST00000444924 1672 ntBASIC17.48■□□□□ 0.39
APLFQ8IW19 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.48■□□□□ 0.39
APLFQ8IW19 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
APLFQ8IW19 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
APLFQ8IW19 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
APLFQ8IW19 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
APLFQ8IW19 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
APLFQ8IW19 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
APLFQ8IW19 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.47■□□□□ 0.39
APLFQ8IW19 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.47■□□□□ 0.39
APLFQ8IW19 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
APLFQ8IW19 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.47■□□□□ 0.39
APLFQ8IW19 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.47■□□□□ 0.39
APLFQ8IW19 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.47■□□□□ 0.39
APLFQ8IW19 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.47■□□□□ 0.39
APLFQ8IW19 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.47■□□□□ 0.39
APLFQ8IW19 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.47■□□□□ 0.39
APLFQ8IW19 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APLFQ8IW19 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
APLFQ8IW19 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
APLFQ8IW19 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
APLFQ8IW19 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
APLFQ8IW19 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
APLFQ8IW19 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
APLFQ8IW19 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
APLFQ8IW19 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms