Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 EFTUD1P1-204ENST00000560401 1798 ntBASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 KRT8P23-201ENST00000560090 1207 ntBASIC28.4■■■□□ 2.14
SNAPC4Q5SXM2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
SNAPC4Q5SXM2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SNAPC4Q5SXM2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC28.39■■■□□ 2.14
SNAPC4Q5SXM2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SNAPC4Q5SXM2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SNAPC4Q5SXM2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC28.39■■■□□ 2.14
SNAPC4Q5SXM2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 MYCLP1-201ENST00000372451 1075 ntBASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 AC241585.1-201ENST00000433527 519 ntBASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
SNAPC4Q5SXM2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 UXT-AS1-201ENST00000590504 1525 ntBASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 AL512638.1-201ENST00000457493 794 ntBASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 IGHV3-71-201ENST00000523324 359 ntBASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC28.38■■■□□ 2.13
SNAPC4Q5SXM2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNAPC4Q5SXM2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 SPTLC1P1-201ENST00000447199 261 ntBASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 AC100757.3-201ENST00000622361 1406 ntBASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 CU639417.3-201ENST00000624240 1404 ntBASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms