Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 AC132938.5-201ENST00000624980 1813 ntBASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 HTR7P1-202ENST00000624664 4411 ntBASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 MYCLP1-201ENST00000372451 1075 ntBASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 AC111152.3-201ENST00000569699 673 ntBASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 MIR3652-201ENST00000579335 131 ntBASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 MIR5100-201ENST00000579544 119 ntBASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 AL023806.1-201ENST00000603994 1649 ntBASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN20Q4JDL3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 NUS1P1-201ENST00000446295 882 ntBASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTPN20Q4JDL3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms