Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
IRX3P78415 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.43■□□□□ 0.86
IRX3P78415 CRYGEP-201ENST00000412192 528 ntBASIC20.43■□□□□ 0.86
IRX3P78415 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.43■□□□□ 0.86
IRX3P78415 MIR4751-201ENST00000578027 74 ntBASIC20.43■□□□□ 0.86
IRX3P78415 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.43■□□□□ 0.86
IRX3P78415 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.43■□□□□ 0.86
IRX3P78415 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
IRX3P78415 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
IRX3P78415 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
IRX3P78415 BCL2-203ENST00000589955 5011 ntBASIC20.43■□□□□ 0.86
IRX3P78415 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
IRX3P78415 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 AP000974.1-201ENST00000623909 2387 ntBASIC20.42■□□□□ 0.86
IRX3P78415 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
IRX3P78415 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
IRX3P78415 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.42■□□□□ 0.86
IRX3P78415 MCCD1P2-201ENST00000423228 335 ntBASIC20.42■□□□□ 0.86
IRX3P78415 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.42■□□□□ 0.86
IRX3P78415 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.42■□□□□ 0.86
IRX3P78415 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.42■□□□□ 0.86
IRX3P78415 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 AC002310.6-201ENST00000624451 1377 ntBASIC20.42■□□□□ 0.86
IRX3P78415 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
IRX3P78415 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 AL353593.2-201ENST00000602529 1483 ntBASIC20.42■□□□□ 0.86
IRX3P78415 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.42■□□□□ 0.86
IRX3P78415 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.42■□□□□ 0.86
IRX3P78415 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 AC006504.4-201ENST00000592118 1568 ntBASIC20.42■□□□□ 0.86
IRX3P78415 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
IRX3P78415 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.41■□□□□ 0.86
IRX3P78415 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
IRX3P78415 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.41■□□□□ 0.86
IRX3P78415 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.41■□□□□ 0.86
IRX3P78415 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 KLF4P1-201ENST00000412782 1185 ntBASIC20.41■□□□□ 0.86
IRX3P78415 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.41■□□□□ 0.86
IRX3P78415 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.41■□□□□ 0.86
IRX3P78415 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.41■□□□□ 0.86
IRX3P78415 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.41■□□□□ 0.86
IRX3P78415 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.41■□□□□ 0.86
IRX3P78415 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.41■□□□□ 0.86
IRX3P78415 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
IRX3P78415 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
IRX3P78415 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 NCF1C-201ENST00000438382 1427 ntBASIC20.41■□□□□ 0.86
IRX3P78415 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
IRX3P78415 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
IRX3P78415 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.41■□□□□ 0.86
IRX3P78415 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
IRX3P78415 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IRX3P78415 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
IRX3P78415 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 AP006288.1-201ENST00000446065 395 ntBASIC20.4■□□□□ 0.86
IRX3P78415 AC108073.2-201ENST00000464002 357 ntBASIC20.4■□□□□ 0.86
IRX3P78415 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.4■□□□□ 0.86
IRX3P78415 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms