Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.15■□□□□ 0.34
YBX1P67809 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
YBX1P67809 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.14■□□□□ 0.34
YBX1P67809 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
YBX1P67809 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.14■□□□□ 0.34
YBX1P67809 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
YBX1P67809 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
YBX1P67809 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.14■□□□□ 0.33
YBX1P67809 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.14■□□□□ 0.33
YBX1P67809 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
YBX1P67809 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
YBX1P67809 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 AC104819.1-201ENST00000504587 486 ntBASIC17.14■□□□□ 0.33
YBX1P67809 FOSL1P1-201ENST00000511041 816 ntBASIC17.14■□□□□ 0.33
YBX1P67809 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.14■□□□□ 0.33
YBX1P67809 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.14■□□□□ 0.33
YBX1P67809 AC138894.3-201ENST00000603787 634 ntBASIC17.14■□□□□ 0.33
YBX1P67809 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.14■□□□□ 0.33
YBX1P67809 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
YBX1P67809 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
YBX1P67809 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
YBX1P67809 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YBX1P67809 AL023806.1-201ENST00000603994 1649 ntBASIC17.14■□□□□ 0.33
YBX1P67809 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
YBX1P67809 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
YBX1P67809 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 UBALD1-205ENST00000590891 2641 ntBASIC17.13■□□□□ 0.33
YBX1P67809 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
YBX1P67809 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
YBX1P67809 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.13■□□□□ 0.33
YBX1P67809 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
YBX1P67809 AC007967.3-201ENST00000434308 558 ntBASIC17.13■□□□□ 0.33
YBX1P67809 MINOS1P3-201ENST00000457048 203 ntBASIC17.13■□□□□ 0.33
YBX1P67809 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.13■□□□□ 0.33
YBX1P67809 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.13■□□□□ 0.33
YBX1P67809 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 MIR3652-201ENST00000579335 131 ntBASIC17.13■□□□□ 0.33
YBX1P67809 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.13■□□□□ 0.33
YBX1P67809 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.13■□□□□ 0.33
YBX1P67809 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.13■□□□□ 0.33
YBX1P67809 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
YBX1P67809 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
YBX1P67809 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YBX1P67809 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.13■□□□□ 0.33
YBX1P67809 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
YBX1P67809 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.12■□□□□ 0.33
YBX1P67809 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
YBX1P67809 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.12■□□□□ 0.33
YBX1P67809 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.12■□□□□ 0.33
YBX1P67809 REXO1L11P-201ENST00000620964 1927 ntBASIC17.12■□□□□ 0.33
YBX1P67809 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
YBX1P67809 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
YBX1P67809 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YBX1P67809 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms