Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.69■□□□□ 0.42
AP1S1P61966 AL133373.2-201ENST00000623187 2828 ntBASIC17.69■□□□□ 0.42
AP1S1P61966 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
AP1S1P61966 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.69■□□□□ 0.42
AP1S1P61966 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP1S1P61966 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.69■□□□□ 0.42
AP1S1P61966 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
AP1S1P61966 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP1S1P61966 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP1S1P61966 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP1S1P61966 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.68■□□□□ 0.42
AP1S1P61966 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.68■□□□□ 0.42
AP1S1P61966 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP1S1P61966 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP1S1P61966 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP1S1P61966 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP1S1P61966 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.68■□□□□ 0.42
AP1S1P61966 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.68■□□□□ 0.42
AP1S1P61966 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.68■□□□□ 0.42
AP1S1P61966 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
AP1S1P61966 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.68■□□□□ 0.42
AP1S1P61966 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.68■□□□□ 0.42
AP1S1P61966 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.68■□□□□ 0.42
AP1S1P61966 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.68■□□□□ 0.42
AP1S1P61966 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AP1S1P61966 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
AP1S1P61966 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.68■□□□□ 0.42
AP1S1P61966 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.68■□□□□ 0.42
AP1S1P61966 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP1S1P61966 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.67■□□□□ 0.42
AP1S1P61966 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.67■□□□□ 0.42
AP1S1P61966 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 AC079781.3-201ENST00000449110 356 ntBASIC17.67■□□□□ 0.42
AP1S1P61966 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AP1S1P61966 SIGLEC30P-201ENST00000455569 941 ntBASIC17.67■□□□□ 0.42
AP1S1P61966 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.67■□□□□ 0.42
AP1S1P61966 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.67■□□□□ 0.42
AP1S1P61966 AL031008.1-201ENST00000619963 541 ntBASIC17.67■□□□□ 0.42
AP1S1P61966 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP1S1P61966 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.67■□□□□ 0.42
AP1S1P61966 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP1S1P61966 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.67■□□□□ 0.42
AP1S1P61966 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP1S1P61966 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
AP1S1P61966 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.67■□□□□ 0.42
AP1S1P61966 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 AC067852.2-201ENST00000590513 2313 ntBASIC17.66■□□□□ 0.42
AP1S1P61966 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP1S1P61966 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.66■□□□□ 0.42
AP1S1P61966 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms