Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.04■□□□□ 0.16
CXCR4P61073 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
CXCR4P61073 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 AL356309.3-201ENST00000624132 1934 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.04■□□□□ 0.16
CXCR4P61073 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 AC046185.3-201ENST00000623228 1824 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 PRORSD1P-201ENST00000295112 541 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.04■□□□□ 0.16
CXCR4P61073 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.04■□□□□ 0.16
CXCR4P61073 TSPY17P-201ENST00000450329 467 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 UBE2SP1-201ENST00000450587 669 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 TSPY20P-201ENST00000450910 630 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.04■□□□□ 0.16
CXCR4P61073 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.04■□□□□ 0.16
CXCR4P61073 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.04■□□□□ 0.16
CXCR4P61073 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 AC233702.5-201ENST00000584107 538 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 AC026471.5-201ENST00000615068 467 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 AL023803.3-201ENST00000615559 522 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.04■□□□□ 0.16
CXCR4P61073 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CXCR4P61073 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.04■□□□□ 0.16
CXCR4P61073 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CXCR4P61073 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 OR6D1P-203ENST00000641209 4860 ntBASIC16.04■□□□□ 0.16
CXCR4P61073 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXCR4P61073 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 LINC00167-201ENST00000530583 1419 ntBASIC16.03■□□□□ 0.16
CXCR4P61073 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.03■□□□□ 0.16
CXCR4P61073 LINC01311-201ENST00000565162 1445 ntBASIC16.03■□□□□ 0.16
CXCR4P61073 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 SLC25A1P2-201ENST00000430693 912 ntBASIC16.03■□□□□ 0.16
CXCR4P61073 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 AL158047.1-201ENST00000445918 881 ntBASIC16.03■□□□□ 0.16
CXCR4P61073 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.03■□□□□ 0.16
CXCR4P61073 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.03■□□□□ 0.16
CXCR4P61073 AL353719.1-201ENST00000566847 864 ntBASIC16.03■□□□□ 0.16
CXCR4P61073 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CXCR4P61073 AC112497.1-201ENST00000624824 639 ntBASIC16.03■□□□□ 0.16
CXCR4P61073 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CXCR4P61073 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.03■□□□□ 0.16
CXCR4P61073 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CXCR4P61073 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.03■□□□□ 0.16
CXCR4P61073 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXCR4P61073 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CXCR4P61073 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CXCR4P61073 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.02■□□□□ 0.16
CXCR4P61073 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CXCR4P61073 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXCR4P61073 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CXCR4P61073 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.02■□□□□ 0.16
CXCR4P61073 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXCR4P61073 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms